CDS
| Accession Number | TCMCG015C15477 |
| gbkey | CDS |
| Protein Id | XP_027108902.1 |
| Location | complement(join(18793062..18793199,18793283..18793384,18793998..18794237,18794393..18794527,18794696..18794800,18794885..18795076,18795151..18795304,18795665..18795726,18795798..18795944,18796029..18796076,18796186..18796314,18796394..18796540,18798309..18798395,18798478..18798609,18798687..18798787,18798864..18798990,18799136..18799252,18799331..18799408,18799629..18799673,18800115..18800240,18800334..18800457,18800593..18800828,18800904..18801086,18802220..18802372,18802490..18802585,18802678..18802783,18802868..18802956,18803034..18803171,18803257..18803493,18803592..18803720,18803796..18803843,18803984..18804130,18804223..18804331,18804507..18804652,18805201..18805268,18805393..18805474,18805563..18805772,18807262..18807498,18807584..18807678,18808853..18808956,18809424..18809677,18809756..18809875,18809999..18810136,18810820..18811014,18811104..18811295,18811383..18811511,18811644..18811757,18811850..18812189,18812294..18812522,18812689..18812983,18815870..18815968)) |
| Gene | LOC113728736 |
| GeneID | 113728736 |
| Organism | Coffea arabica |
Protein
| Length | 2417aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027253101.1 |
| Definition | CCR4-NOT transcription complex subunit 1 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Ccr4-not transcription complex |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12604
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03018
[VIEW IN KEGG] map03018 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGATCCCGTTTGCTTTGACCGCGTCTACTCAGATTCGGTATCTGCTGCAGAGCTTGAACGCCTCCAACTCCGATGCCGTCCTCCAAGAACTCTGTCAGTTCACTGCATATGGAGTTGAAGGAAGCATATTGTTACTTCAGACTTGCTTGGATCATCTAAATATTCATGGGAAAGATTTTAAGAATGTGCAATTTGAACCAGTGTTTGGTTCAGTGTTTAGATATATCCTGGATAAGCCCAATTTCAGCACAGTGTTCTTTCAATCTGTAAAGAATACAATCAATGAAGAATTTCTGGAAAGTCTTTGTAATGCTTTGCACCTCTCAGCATCTGAGAGGATTGCAGTTGGTCTTGCTCTGTCAGATTCAGAGAACCTTGACATTAGATTGTATGGAAAAAACTTCTGCATGGCTCAGATTGCAGAATTATGTGCCGATCAAATGCCTGTTGACTCTGTGGAGCAAATTCAGCAGATTCTGATGTTCCTTCATCGGTCTGAAGGCCTTTCAAAGCATGTAGATGCATTTATGCGGATGTTATCTCTCGTACAATTGAAGGAGGGCACACAGTTCATCTTAGCTCCACTCTTTTCAGACGAACTTCGTGAGGCTAACTTCTTCAGGAACTTGAATTTTTCCAATCAAAATGATGAGGATGATTTTGATGCTGTCCTAGCTGAAATGGAGAAGGAAATGTGTATGGCTGATATATTGAAGGAATTGGGATATGGTTGCACATTTAGCGTTTCAGAATGCAAAGAGATGTTGTCTCTTTTCTCACCACTTACTGAGATCACTGTTGCTAGGATGCTTGGTACAATTTCCCGTACCTATACTGGCCTTGAGGACAATCAAAATGTTTTCTCAACGTTCCGTTCAGCCCTTGGTAGCAGCAGTTCATCTGATATGCCTACTTTGAACTCTTGGAATCCCGATGTCCTCGTAGATTCAATCAAGGAGCTTGCTCCTGAAATTAACTGGACAGCTGTTATTGAAAACCTGGATCATGAGGGATTTTATGTCCCTAGTGAGGCTGCTTTTTCATTTTTCATGTCTGTTTATCATCGTGCATGCCAGGATCCCTTTCCTCTTCATGCTGTTTGTGGCTCTGTTTGGATGAATACTGAGGGCCAGCTCTCTTTTCTTAAGTATGCTGTTGCAGTACCTCCTGAAGTGTTTACTTTTGCACATTCTGGCAGGCAGTTGGCTTATCTAGATGCTGTGAATGGCCACAAGTTTCAACTTGGACATGCAAATCATGCGTGGTTATGCCTTGATCTTTTGGAGGTTCTGTGCCAGCTGGCTGAGAGGGGTCATGCAAGTACTGTGCGATCCATTCTTGAGCAACCTCTAAAGCAGTATCCAGAAATCTTGCTCCTTGGGATGGCTCATGTTAATACTGCATATAATCTCATCCAGAATGAAGTGTCTTCAGCTGTGTTCTCCGTGATACTCAAGAATTCAGCAGGGAATAGTATGCTTCTTCATTTGTGGCATGTCAACCCTAGCATGCTGTTGCGGGGATTTGCAGATGCTCTTAATGCTGACCAGGAGAATGTAAATAGGGTTTTGGATGCCTGCCTGGAGCTGAAGATTCTATCTCCGGTGCTGGATATGATTCCTTCTTCTTTTGCTATTAGACTTGCTGCGGTTGCTTCTAGAAAGGAACCTATTGACCTAGAGAAGTGGTTGACCGCGAACTTAATGACATACAAGGATGCTTTCTATGAGGAGTGCATAAGATTTCTAAAGGAGGTTCAGCTTGCTGCTCAGGAAGTTTCTGCTAACCACTTCCAACCTTCTGGTGCCATGTGGAATATTTGTTCAGAGACTTCTTCTACCTTCTTAAAGGTCCTTCAATCGCATACAGACCAGTTAACCTCAGGCCACTTGCCTGAAGAATTGGAGAAATTGCATGAGTTATATATGCATGCCAATTCTAGACAGAAAAACGGTAGCAATGCTGATCCGTCATCAACTGATGGTTTTCCTGCTGACATTGAATCTGAAGCAAACTCTTATTTCCAGCAAATGTTTTCTGGTCAACTGACCATTGATGCAATGATTCAAATGCTTGCTCGTTTCAAAGAATCTCCAGAGAAAAGGGAACAATCAATTTTCGAGTGCATGATCGCTAATTTATTTGAGGAGTACAAGTTTTTCTCCAAGTATCCTGAAAGGCAGCTCAAGATTGCTGCAGTTCTTTTTGGATCTCTTATCAAGCATCAATTGGTGACGCATCTCACGCTTGGTATTGCTTTGCGGGCTGTTTTGGATGCATTGCGCAAACCTGCAGATTCGAAAATGTTTGCCTTTGGGACTAAGGCTCTGGAACAGTTTGTGGATCGCCTGATTGAGTGGCCACAGTACTGCAATCATATCTTACAAATATCTCATCTACGTGCTAATCATTCAGAACTTGTTGCTTTTATTGAGAGGGCGCTTGCCCGAATCTCTGCCGCACATTCAGAATCTGATGCACTTCATGGTGCTGCTGGTGATCAACATGGTGCTATTCAGGCATCTTCCCCTAACATGGAAATGTCAAGCTCATCATTTCCATTGGTTGGATCTAGTAATTCACAACAAGGCCTGCAAGTTTCTTCTGCAATCCAGCTCCCACAGAGGCAGCAAAATCAATTAGATGAGCGGAAAACCTCTGGAAGCCTGCCCAATTTCTTAAAACCTGCTTTATCCTCTGCAAGCCAAGCTGCTGGTCCCCTAGCAAGTGATACTTCTGGCATTCAGAAGTCACAAAATGCAGTTAGTGCCTTGGCTGCACACACTTCATCTCCTGGTTTTGTTCGTGCATCACGTGCCATTACCTCAGCAAGGTTTGGCTCTGCTTTAAATATTGAAACACTTGTTGCTGCTGCAGAGAGAAGAGAAACTCCTATAGAGGCTCCAGCATCAGAGATTCAGGATAAAATATCATTTATTATCAATAATCTATCTGCTGCAAATGTTGAAGCTAAAGCGAAAGAATTTACTGAGATATTAAAAGATCAATACTATCCCTGGTTTGCTCAGTATATGGTGATGAAAAGGGCGAGCATTGAGCCAAATTTTCATGACTTGTACTTGAAGTTTCTGGAGAAAGTGAATTCAAAGCAATTAACCAAAGAGATTGTGCAAGCGACCTATGAGAATTGCAAGGTTCTTTTGGGATCAGAGCTTATAAAATCAAGTTCGGAAGAGCGTTCGTTGCTAAAAAATCTTGGGAGCTGGCTTGGAAAGATCACCATTGGCAGGAATCAAGTATTGAGGGCACGGGAGATTGATCCCAAATCCTTGATTATAGAGGCATATGAGAAAGGATTGATGATTGCAGTCATTCCCTTCACCTCCAAGGTTCTGGAACCAAGCCAAGGTAGCATAGCATATCGACCCCCTAACCCATGGACCATGGGTATTCTTGGATTGCTTGTAGAGATTTATGCTATGCCAAATTTGAAGATGAACCTAAAGTTTGACATTGAGGTGTTGTTCAAGAACCTTGGTGTGGATATGAAAGACGTAACTCCTACTTCTCTCCTTAAGGATAAGGTCAGAGAAGTTGAAGGAAACCCTGATTTTTCCAACAAGGATGTCGGATCTTCCCAACAACAGATGGGTGAAGTCAAATCTAGCATGATACCTGCAATAAATCAAGTTGAGCTGCCTCTTGAGGTTACTGGTCCAGCACATCCAGGCGGACACTCACGCGTATTATCTCAGTATGGTGGCCCTGCCCCTATGCATCTTTCATCTGGGGCATTGGCAGAAGATGAGAAGCTAGCTGCTCTAGGATTATCTGATCAGCTTCCTTCTGCACAAAGTCTTCTACAGGGGCAGTCACCATTCTCTGTCAATCAGCAGCTTGCTGCACCAGCATCTAACATTGAGCAACAAGTGATTGTCAATTCAAAGCTTCATACATTAGGCTTGCACTTGCACTTTCAGAGTGTACTTCCAATAGCGATGGATAGAGCTATCAAGGAGATAGTTTCCAACATTAAACAACGAAGTGTTTCTATTGCAACTCAAACAACTAAAGAACTTGTTTTAAAGGACTATGCTATGGAGACAGATGAGACACGCATACGTAATGCAGCACATCTTATGGTTGCAAGTTTAGCAGGAAGTTTAGCTCATGTTACTTGCAAGGAACCCTTGCGAGCCTCAATATCAAGTCAGCTCAGGAATTCACTGCAGGGCCTGAATATTGCAAGTGAACTCCTTGAACAAGCTGTTTTACTTGTGACCAATGACAATCTTGACCTGGGTTGTGCACTGATTGAACAAGCTGCCACAGAGAAGGCAATACAAACCATTGATGGAGAAATAGCTCAGCAGCTAGCTATAAGAAGGAAGCATAGAGAGGGCGTTGGTCCAACATTTTTTGATGCAAGCCTCTATACGCAAGGTCATATGGGTGTTTTGCCTGAAGCTCTTCGTCCTAAACCAGGCCGCCTGTCCCATTCTCAGCAGCGAGTTTATGAGGATTTTGTGCGTTTACCCTGGCAAAATCAATCTACCCAGAGCTCAAATGCATTGCCTGTTGGCCCTCTAGTATCATCTACAAGCAGTAGTGTTTCGCGGGGATACATGCAAGCTTCAGGGCAATTAAATGCTGGAGTTTACTCTTCTGGAGCAGTAAGCTCAGGAATGGGTTCTGTTCCACAGCCCTTGGATGTTACGTCCGATGATCTGGATACAAGTTTGACTCAGATTCAAAGTGTTTCATCAGCTCATGTTGGGTTGGCTGACAGTGTCAGTCCACGCAATGTTGAAAGTGAAAATGTAGTTGCATCATTTTCTTCAGTGCCTACTGAACTACAGTCAGTTGAATCTGTTGTGAAAGAACCAGGAACAGCAATGCAGCAACTCAATCAGTCTTCAGCTTCAGAGCGCTCTGGAAGCAGTGTACCAGAACCATTATCTACCACTGGTGATGCACTGGATAAGTATCAGGTTTTTGCTGAGAAGCTTGAAAATCTGTTGACTGGTGATGCCAAAGAAGCAGAGATTCAGGGAGTAATTGCTGAAGTTCCAGCAATAATTTTAAGATGTATAAGTCGAGATGAAGCTGCATTGGCTGTGGCTCAAAAGGCTTTCAAGGCTTTGTATGAAAATGCATCAAATATGGCACATGTCAGTGCTCATCTTGCTATCTTGGCTGCCATGCGTGATGTCAGCAAGCTTGTTGTTAAGGAGCTCACTAGTTGGGTGATTTACTCTGAAGAGGAGCGCAAGTTTAACAAAGATATAACAGTTGGTCTCATACGAAGTGAACTACTAAACCTTGCTGAGTACAATGTGCATATAGCCAAGCTCATTGATGGTGGAAGGAATAAGGCTGCTACTGAATTTGCTATTTCTCTTATTCAAACCTTGGTTATTGGTGATACCAGAGTCATATCAGAGCTGCATAACCTGGTTGATGCATTGGCTAAGCTTGCTGCTAGACCAGGATCTCCCGAGTCTTTACAGCAGCTTGTTGAGATTGTGAAGAATCCATCTACAGCTGCTTTGTCTGGTATTGCTATTGGGAAGGATGATGCCACCCGACAGGTCAAAGACAAAAAGGGGGCAGTGCTCTCTGCAGCAAGCAGGGAAGAGTATGGTGCAGGAGCAGATTCTGTTGAACCAGATCCTGCTGGCTTTCGTGAGCAGGTTTCCATGCTATTTGCGGAGTGGTATCGAATTTGTGAACTTCCTGGGGCTAATGATGCAGCTTGTGCACATTATGTTTTACAATTACAGCACAATGGCCTACTTAAAGGAGATGATACCTCAGATCGCTTTTTCCGCCGCCTAACAGATCTTTCAGTTTCGCATTGCCTAACTTCTGAGGTGATTGGATCTGGTCCTTCCCAATCACATCAAACACAACCTTTATCATTCCTTGCTATTGATATCTACGCCAAATTAGTATACTCAGTTCTGAAGTTTTGTTCTGTAGACCAGGGATCTAGCAAATTATTTCTTCTTCCTAAGGTTCTTGCGGTGACCGTGAAGTTCATTCAGAAGGATGCTGAGGAGAAGAAAACATCCTTTAATCCAAGACCATATTTTAGGCTCTTCATTAACTGGATCTTGGATTTGTGTTCTCTGGAACCTGTTTTTGATGGCGCGAACTTTCAGGTATTGACTGCTTTAGCAAATGCCTTCCATGCTCTCCAGCCCCTTAAAGTTCCAGGGTTCAGCTTTGTGTGGCTTGAGCTGGTGAGTCATAGAAGCTTCATGCCAAAATTACTTGCCGGAAACGCTCAGAAAGGGTGGCCATACATCCAGCGCCTCTTAGTTGACATGTTTCAGTTCATGGAGCCATTTTTGAGAAATGCTGAGCTTGGAGAACCGATCCATTTTCTCTATAAAGGGACACTAAGGGTGTTGCTGGTGCTGCTTCATGATTTTCCCGAATTCCTATGTGATTATCACTTTAGCTTCTGTGATGTCATCCCTCCTAGTTGCATACAGATGCGAAACATTATCCTGAGTGCATTTCCTCGCAATATGAGGCTACCTGATCCCTCAACTCCAAACTTAAAGATTGATCTTCTGGCGGAGATTAGTCAATCACCACGGATTCTATCGGAGGTTGATGCTGCACTTAAAGCAAAGCAGATGAAGAATGATGTAGATGAATACCTAAAGACAAGGCAACAAGGGTCTACATTTCTCACTGATTTAAAGCAGAAACTTCTGCTTTCTCCAAATGATGCTGCCAGAGCTGGAACTCGTTACAATGCACCGCTCATCAATTCCCTTGTGCTGTATGTTGGGATGCAGGCTATACAGCAGCTGCAGGCAAGAACCCCACCTCATGCACAGTCAATGGCCAGTAGTGTTCCACTTGCTGTTTATCTGGTTGGTGCTGCTCTGGATATCTTCCAGACATTAATAATGGATCTAGACACTGAGGGACGTTATCTCTTCTTGAATGCGGTTGCTAACCAGTTGCGTTATCCAAACAACCACACACACTACTTCTCTTTCATCTTGCTCTACCTATTTGCAGAATCAAACCAGGAGATGATTCAGGAGCAAATCACTAGGGTATTGTTGGAGCGCCTAATTGTCAATAGGCCACATCCTTGGGGTTTGCTGATTACTTTTATTGAGCTTATTAAGAATCCTAGGTACAACTTCTGGAGCCGTACTTTCACTAGATGTGCACCAGAGATTGAGAAACTCTTTGAATCTGTTTCGAGATCTTGTGGTGGTCCTAAACCTGTCGATGAAAGTGTAGTTTCTGGTGGGAGCAATTGA |
| Protein: MIPFALTASTQIRYLLQSLNASNSDAVLQELCQFTAYGVEGSILLLQTCLDHLNIHGKDFKNVQFEPVFGSVFRYILDKPNFSTVFFQSVKNTINEEFLESLCNALHLSASERIAVGLALSDSENLDIRLYGKNFCMAQIAELCADQMPVDSVEQIQQILMFLHRSEGLSKHVDAFMRMLSLVQLKEGTQFILAPLFSDELREANFFRNLNFSNQNDEDDFDAVLAEMEKEMCMADILKELGYGCTFSVSECKEMLSLFSPLTEITVARMLGTISRTYTGLEDNQNVFSTFRSALGSSSSSDMPTLNSWNPDVLVDSIKELAPEINWTAVIENLDHEGFYVPSEAAFSFFMSVYHRACQDPFPLHAVCGSVWMNTEGQLSFLKYAVAVPPEVFTFAHSGRQLAYLDAVNGHKFQLGHANHAWLCLDLLEVLCQLAERGHASTVRSILEQPLKQYPEILLLGMAHVNTAYNLIQNEVSSAVFSVILKNSAGNSMLLHLWHVNPSMLLRGFADALNADQENVNRVLDACLELKILSPVLDMIPSSFAIRLAAVASRKEPIDLEKWLTANLMTYKDAFYEECIRFLKEVQLAAQEVSANHFQPSGAMWNICSETSSTFLKVLQSHTDQLTSGHLPEELEKLHELYMHANSRQKNGSNADPSSTDGFPADIESEANSYFQQMFSGQLTIDAMIQMLARFKESPEKREQSIFECMIANLFEEYKFFSKYPERQLKIAAVLFGSLIKHQLVTHLTLGIALRAVLDALRKPADSKMFAFGTKALEQFVDRLIEWPQYCNHILQISHLRANHSELVAFIERALARISAAHSESDALHGAAGDQHGAIQASSPNMEMSSSSFPLVGSSNSQQGLQVSSAIQLPQRQQNQLDERKTSGSLPNFLKPALSSASQAAGPLASDTSGIQKSQNAVSALAAHTSSPGFVRASRAITSARFGSALNIETLVAAAERRETPIEAPASEIQDKISFIINNLSAANVEAKAKEFTEILKDQYYPWFAQYMVMKRASIEPNFHDLYLKFLEKVNSKQLTKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKITIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPSQGSIAYRPPNPWTMGILGLLVEIYAMPNLKMNLKFDIEVLFKNLGVDMKDVTPTSLLKDKVREVEGNPDFSNKDVGSSQQQMGEVKSSMIPAINQVELPLEVTGPAHPGGHSRVLSQYGGPAPMHLSSGALAEDEKLAALGLSDQLPSAQSLLQGQSPFSVNQQLAAPASNIEQQVIVNSKLHTLGLHLHFQSVLPIAMDRAIKEIVSNIKQRSVSIATQTTKELVLKDYAMETDETRIRNAAHLMVASLAGSLAHVTCKEPLRASISSQLRNSLQGLNIASELLEQAVLLVTNDNLDLGCALIEQAATEKAIQTIDGEIAQQLAIRRKHREGVGPTFFDASLYTQGHMGVLPEALRPKPGRLSHSQQRVYEDFVRLPWQNQSTQSSNALPVGPLVSSTSSSVSRGYMQASGQLNAGVYSSGAVSSGMGSVPQPLDVTSDDLDTSLTQIQSVSSAHVGLADSVSPRNVESENVVASFSSVPTELQSVESVVKEPGTAMQQLNQSSASERSGSSVPEPLSTTGDALDKYQVFAEKLENLLTGDAKEAEIQGVIAEVPAIILRCISRDEAALAVAQKAFKALYENASNMAHVSAHLAILAAMRDVSKLVVKELTSWVIYSEEERKFNKDITVGLIRSELLNLAEYNVHIAKLIDGGRNKAATEFAISLIQTLVIGDTRVISELHNLVDALAKLAARPGSPESLQQLVEIVKNPSTAALSGIAIGKDDATRQVKDKKGAVLSAASREEYGAGADSVEPDPAGFREQVSMLFAEWYRICELPGANDAACAHYVLQLQHNGLLKGDDTSDRFFRRLTDLSVSHCLTSEVIGSGPSQSHQTQPLSFLAIDIYAKLVYSVLKFCSVDQGSSKLFLLPKVLAVTVKFIQKDAEEKKTSFNPRPYFRLFINWILDLCSLEPVFDGANFQVLTALANAFHALQPLKVPGFSFVWLELVSHRSFMPKLLAGNAQKGWPYIQRLLVDMFQFMEPFLRNAELGEPIHFLYKGTLRVLLVLLHDFPEFLCDYHFSFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEISQSPRILSEVDAALKAKQMKNDVDEYLKTRQQGSTFLTDLKQKLLLSPNDAARAGTRYNAPLINSLVLYVGMQAIQQLQARTPPHAQSMASSVPLAVYLVGAALDIFQTLIMDLDTEGRYLFLNAVANQLRYPNNHTHYFSFILLYLFAESNQEMIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWSRTFTRCAPEIEKLFESVSRSCGGPKPVDESVVSGGSN |